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OTUshuff

Published by Agricultural Research Service · Updated 02/13/2024

Last updated
02/13/2024
Update frequency
Not listed
Formats
Web only
Coverage
Nationwide
Federal data

About this dataset

OTUshuff is a set of tools written in Perl to identify and correct for the presence of pseudo-diversity in contrasts between microbial communities. The variably weighted Odum dissimilarity (DwOdum) allows for down-weighting the influence of either abundant or rare taxa in calculating a measure of similarity between two communities. We show that down-weighting the influence of rare taxa can be used to minimize pseudo b-diversity arising from incomplete sampling. Down-weighting the influence of abundant taxa can increase the sensitivity of hypothesis testing. OTUshuff is an associated test for identifying the presence of pseudo-diversity in pairwise community contrasts. Resources in this dataset: - Resource Title: OTUshuff. File Name: Web Page, url: https://www.ars.usda.gov/research/software/download/?softwareid=462&modecode=30-12-30-15 download page

Files and access

Links open the official government source

Links open outside websites we do not control.

Frequently asked questions

Who publishes OTUshuff?
Agricultural Research Service, part of Department of Agriculture, publishes this dataset on Data.gov.
How often is it updated?
The publisher does not list a schedule. The last update was on 02/13/2024.
How do I download it?
Use the official source link above to view or request the data.

Where this catalog comes from

Catalog checked 10/24/2026

We list dataset descriptions only. Downloads and APIs link straight to the official government source, which holds the current version and its terms of use.

Source: Data.gov · Last updated 10/24/2026 · Listing only; the data stays with the publisher

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