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OTUshuff
Published by Agricultural Research Service · Updated 02/13/2024
- Last updated
- 02/13/2024
- Update frequency
- Not listed
- Formats
- Web only
- Coverage
- Nationwide
- Federal data
About this dataset
OTUshuff is a set of tools written in Perl to identify and correct for the presence of pseudo-diversity in contrasts between microbial communities. The variably weighted Odum dissimilarity (DwOdum) allows for down-weighting the influence of either abundant or rare taxa in calculating a measure of similarity between two communities. We show that down-weighting the influence of rare taxa can be used to minimize pseudo b-diversity arising from incomplete sampling. Down-weighting the influence of abundant taxa can increase the sensitivity of hypothesis testing. OTUshuff is an associated test for identifying the presence of pseudo-diversity in pairwise community contrasts.
Resources in this dataset:
- Resource Title: OTUshuff.
File Name: Web Page, url: https://www.ars.usda.gov/research/software/download/?softwareid=462&modecode=30-12-30-15
download page
Files and access
Links open the official government source
- https://www.ars.usda.gov/research/software/download/?softwareid=462&modecode=30-12-30-15ars.usda.govWeb page
Links open outside websites we do not control.
Frequently asked questions
- Who publishes OTUshuff?
- Agricultural Research Service, part of Department of Agriculture, publishes this dataset on Data.gov.
- How often is it updated?
- The publisher does not list a schedule. The last update was on 02/13/2024.
- How do I download it?
- Use the official source link above to view or request the data.
Where this catalog comes from
- Data.gov CatalogU.S. General Services Administration
- State and local open data portalsSocrata Discovery API
- State and city CKAN portalsCalifornia, Virginia, Boston, Houston and more
- Government ArcGIS Hub sitesCity and county GIS data
Catalog checked 10/24/2026
We list dataset descriptions only. Downloads and APIs link straight to the official government source, which holds the current version and its terms of use.
Source: Data.gov · Last updated 10/24/2026 · Listing only; the data stays with the publisher
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